Laboratory equipment
Major equipment
Linux clusters:
- 12-core processors (2.2 GHz AMD Opteron 6174): 768 cores (modules of 48-cores), Infiniband QDR (40Gb/s).
- Quad-core processors (64-bit AMD Opteron): 64 cores (4 modules of 16-cores), Infiniband network.
Five strong Linux workstations containing 2x Intel Xeon 6C/12T 3.46GHz processors, and 2x NVIDIA GTX 590 graphics cards involving 2048 CUDA Cores in total.
Monitors ZALMAN for 3D visualization (with 3D passive polarized glasses).
Scientific software (programs for protein modeling, ligand docking and visualization):
- YASARA-Dynamics-NMR (Biosciences) - yearly renewing license
- NAMD, GROMACS, CHARMM - programs for molecular dynamics
- VMD, MolMol, PyMol etc. - programs for molecular visualizations
- Schrodinger software Suite
- Discovery Studio (Accelrys Inc.), Sybyl (Tripos Inc.)
Access to Supercomputer Centres in Warsaw/Poland (ICM), Gdansk/Poland (TASK), Pittsburgh/USA (PSC), Barcelona/Spain (BSC).
THE LATEST NEWS
- July 2023.GS-SMD web server
for SMD simulations of γ-secretase complex.
Publication in Nucleic Acids Research 2023 Web server issue.
- August 2022.COGRIMEN
- June 2021.GPCRsignalOur new service GPCRsignal was recently published in NAR 2021, W1.